Resource

mRIN: Software package for direct assessment of mRNA integrity from RNA-Seq data.
Links : Documentation; Github

Splicescope: R package to predict neuronal maturation stages using splicing profile.
Links: Github; Galaxy Documentation;

mCrossBase: a database of RBP binding motifs and crosslink sites.
Links: Link;

Conference

Modeling RNA-binding protein specificity in vivo by precisely registering protein-RNA crosslink sites, Cold Spring Harbor meeting on Eukaryotic mRNA Processing, August 20-24, 2019, Cold Spring Harbor, NY (Selected talk)

Modeling RNA-binding protein specificity in vivo by precisely registering protein-RNA crosslink sites, Annual Retreat of Department of Systems Biology of Columbia University, Octorber 5, 2018, NY (Poster)

Precise temporal regulation of alternative splicing during neural development, Post-Transcriptional Gene Regulation-Gordon Research Conference(GRC) July 15-20, 2018, Newry, ME(Poster)

Characterization of kinase gene expression and splicing profile in prostate cancer with RNA-Seq data, 13th International Symposium on Bioinformatics Research and Applications (ISBRA) May 30 - June 2, 2017, Honolulu, Hawaii (Selected talk)

Characterization of kinase gene expression and splicing profile in prostate cancer with RNA-Seq data, 5th RECOMB Satellite Workshop on Computational Cancer Biology (RECOMB-CCB 2016), April 16- 17, 2016, LA, CA (Selected talk)

A combinatorial regulatory program controls the precise timing of RNA splicing switches during cortical development. 10th Cold Spring Harbor meeting on Eukaryotic mRNA Processing, August 18-22, 2015, Cold Spring Harbor, NY (Poster)

Differential alternative splicing identification in kinome and phosphatome in prostate cancer from RNA-Seq data, 17th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2013), April 11-12, 2013, Beijing, China (Poster)

Differential alternative splicing identification in kinome and phosphatome in prostate cancer from RNA-Seq data, Cold Spring Harbor Asia Conference on High Throughput Biology - Genomics and Epigenomics, October 15-19, 2012, Suzhou, China (Poster)

Awards and Fellowship

  • Best poster award in the annual retreat of Department of Systems Biology of Columbia Univesity, 102018
  • Tsinghua University Excellent PhD Dissertation, 07/2016
  • Tsinghua University Outstanding Graduate, 07/2016
  • CSC Scholarship, 2015-2016
  • National Graduate Scholarship of China, 2015-2016
  • National Graduate Scholarship of China, 2011-2012
  • Outstanding Graduate, HUST, 07/2011
  • Academic Excellence Scholarship, HUST, 2008-2009
  • National Scholarship of China, 2007-2008